Publications

• Komljenovic A*, Roux J*, Wollbrett J, Robinson-Rechavi M, Bastian FB (2018): BgeeDB, an R package for retrieval of curated expression datasets and for gene list expression localization enrichment tests. F1000Research 5:2748.

• Kieler M, Pramer LS, Heller G, Hofmann M, Spreger S, Hanetseder D, Niederreiter B, Komljenovic A et al. Itaconate mediates a metabolic crosstalk between osteoclasts and osteoblasts, Annals of the Rheumatic Diseases 83 (Suppl 1), 644-644, 2024

• Kerndl M, Vogel A, Komljenovic A*, Bausbacher T, Riedl C, Sango R, Oberbichler L, Korosec A, Musiejovsky L, Hofmann M, Kieler M, Garrido Quemada L, Brunner J, Cairns JL, Cheng P, Kitt K, Isaguirre C, Köcher T, Rattei T, Hametner S, Hopf C, Sheldon RD, Sharif O, Schabbauer G. Infiltration of monocyte-derived macrophages perturbs the CNS metabolic landscape licensing arginine catabolism and augments neuro-inflammation (submitted – Nature Immunology), 2024.

• Komljenovic A, Li H, Kutalik Z, Auwerx J, Robinson-Rechavi M (2019): Cross-species functional modules link proteostasis to human normal aging. PLoS Computational Biology 15 (7), e1007162.

• Li H, Rukina D, David FPA, Li TY, Oh CM, Gao AW, Katsyuba E, Bou Sleiman M, Komljenovic A, Huang Q, Williams RW, Robinson-Rechavi M, Shoojans K, Morgenthaler S, Auwerx J (2019): Identifying gene function and module connections by the integration of multispecies expression compendia. Genome Research 12:2034-2045

• McDaid AF, Joshi PK, Porcu E, Komljenovic A, Li H, Sorrentino V, Litovchenko M, Bevers RPJ, Rüeger S, Raymond A, Bochud M, Deplancke B, Williams RW, Robinson-Rechavi M, Paccaud F, Rousson V, Auwerx J, Wilson JF, Kutalik Z (2017): Bayesian association scan reveals loci associated with human lifespan and linked biomarkers. Nature Communications 8:15842

• SIB Swiss Institute of Bioinformatics Members. (2016); The SIB Swiss Institute of Bioinformatics’ resources: focus on curated databases Nucleic Acids Research 44 (D1), D27-D37

• Morales M, Sentchilo V, Bertelli C, Komljenovic A, Kryuchkova-Mostacci N, Bourdilloud A et al. (2016): The Genome of the Toulene-Degrading Pseudomonas veronii strain 1YdBTEX2 and Its Differential Gene expression in Contaminated Sand. Plos One 11 (11):e0165850

• Menigatti M, Staiano T, Manser CN, Bauerfeind P, Komljenovic A, Robinson MD, Jiricny J, Buffoli F, Mara G (2013): Epigenetic silencing of monoallelically methylated miRNA loci in precancerous colorectal lesions. Oncogenesis 2:e56

• Komljenovic A, Frochaux M, Gardeux V, Deplancke B, Robinson-Rechavi M (2020): Deciphering sex differences of the dynamic transcriptional signatures during D. melanogaster aging. (prepared, submitted to Genome Research and biorxiv).

• Huang S, Komljenovic A, Barbieri CE et al. (2022): Single-cell recovery of the prostate cancer transcription factor AP-1. (prepared, submitted to Nature Methods)

* equal contribution